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132
questions
Tagged
7
views
no
answers
no
votes
2021-04-09 17:59:02 -0500
ChristiRob
SEO Shortcuts - The simple Means
ما
هو
السيو
27
views
no
answers
no
votes
2021-03-23 15:37:55 -0500
Anonymous
MetaCyc hierarchy to invetigate/identify specific pathways
metacyc
pathway
hierarchy
497
views
no
answers
no
votes
2020-10-22 06:42:02 -0500
Anonymous
Disk usage when creating a new PGDB
Disk
usage
new
pgdb
481
views
1
answer
no
votes
2020-10-05 11:05:27 -0500
anamika
Installation hangs, ptools v.24.0 on Mac OS X Catalina 10.15.7
Mac
installation
v.24
404
views
no
answers
no
votes
2020-10-01 10:40:02 -0500
gpharhay
Installation of tools 24.0 on Mac
24.0
installation
Mac
OSX
371
views
no
answers
no
votes
2020-10-01 10:40:00 -0500
gpharhay
Installation of tools 24.0 on Mac
24.0
installation
Mac
OSX
327
views
1
answer
no
votes
2020-08-14 00:13:27 -0500
Richard
xml parsing error
pathologic
75
views
1
answer
no
votes
2020-07-18 12:55:09 -0500
Suzanne Paley
Web server mode and MySQL PGDBs
webserver
142
views
2
answers
no
votes
2020-07-08 02:58:04 -0500
mdubois
Missing Pathways in PTools compared to Microcyc
Missing
pathways
718
views
1
answer
no
votes
2020-07-03 15:10:17 -0500
Suzanne Paley
HTML tags and entites supported in pathway tools
html
669
views
2
answers
no
votes
2020-06-30 23:58:38 -0500
bcamara
How to include new instances to a compound class
lipids
compound
instances
1k
views
1
answer
no
votes
2020-06-23 02:04:29 -0500
Suzanne Paley
What exactly does the reaction direction mean
reactions
reaction
1k
views
1
answer
no
votes
2020-06-23 01:26:20 -0500
BorisGorelik
Missing direction information in reactions.dat file
data
reaction
reactions
662
views
no
answers
no
votes
2020-06-14 23:02:29 -0500
jsbowman
Pathologic can't access eutils through proxy server.
pathologic
294
views
1
answer
no
votes
2020-06-14 22:49:09 -0500
jsbowman
pathologic error: linux-vdso.so.1: No such file or directory
pathologic
119
views
2
answers
no
votes
2020-06-01 02:44:31 -0500
bcamara
Unbalanced reactions not producing biomass metabolites
biomass
metabolites
unbalanced
reactions
93
views
1
answer
no
votes
2020-05-03 13:22:42 -0500
Suzanne Paley
Introduce heterologous genes into database
New
creating_gene
453
views
2
answers
no
votes
2020-04-23 14:00:06 -0500
dnnunn
Issue with Windows version crash
PtoolsError
81
views
1
answer
no
votes
2020-04-07 13:22:26 -0500
waikit
What is the right way to include transport reactions from experimental data?
Transport
reactions
from
experimental
data
1k
views
2
answers
no
votes
2020-03-05 14:25:48 -0500
Suzanne Paley
Topology of pathway differences between pathway-tools and .owl file
paxtools
OWL
metacyc
449
views
1
answer
no
votes
2020-02-12 12:20:15 -0500
Suzanne Paley
Problem with Regulatory Overview with Web Ptools 23.5 on Centos 7
Centos
javascript
regulatory
overview
1k
views
3
answers
no
votes
2020-01-09 14:01:20 -0500
waikit
how I can edit the different comparments of my PGDB
Compartments
in
fba
file
1k
views
1
answer
no
votes
2020-01-02 19:02:24 -0500
Suzanne Paley
Getting "Object is not coercible to a frame for KB METACYC 22.0" Error when creating PGDB using Pathologic
pathologic
pgdb
pgdb+publish+ptools
pathway-tools
178
views
1
answer
no
votes
2019-12-27 02:40:31 -0500
Suzanne Paley
Is it possible to obtain older versions of Pathway Tools?
pathway-tools
version
181
views
1
answer
no
votes
2019-12-20 10:53:49 -0500
Suzanne Paley
SBML Import
sbml
1k
views
1
answer
no
votes
2019-11-27 12:53:29 -0500
Suzanne Paley
No reactions for this EC number are present in MetaCyc database
no
reaction
ec
number
1k
views
1
answer
no
votes
2019-11-18 13:22:18 -0500
Suzanne Paley
Reactions not found in MetaCyc
reactions
not
metacyc
1k
views
1
answer
no
votes
2019-11-15 02:08:48 -0500
Suzanne Paley
Using Pathway tools for unannotated genome
metagenomes
195
views
1
answer
no
votes
2019-10-24 16:28:49 -0500
Suzanne Paley
remove pathways from a PGDB
removing
pathways
from
pgdb
123
views
2
answers
no
votes
2019-10-03 03:45:30 -0500
bcamara
Make reaction assignments to polypeptides classified in the "No match" category
reaction
assignments
1
2
3
4
5
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