Interproscan results parsed into a PGDB

asked 2017-06-16 18:17:24 -0500

anonymous user


Is there a preferred way to parse in interproscan results into a PGDB? I ran all of my bug's proteins against a local installation of interproscan and have a 80MB XML file that I would like to parse in. I could convert it into a tsv, JSON, GFF3 file. I prefer not to write another parser to stuff the interproscan results into a GenBank file and rebuild the PGDB from scratch. Suggestions?

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