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Hi,
I am working with outputs from Apollo (a GMOD tool, JBrowse plugin for manual annotations).
Does anybody work with both Apollo and Pathway tools ? How do you handle the conversion from GFF3 (Apollo output) to GenBank (input format for Pathway Tools) ?
Thanks for your help.
Loraine Guéguen
Pathway Tools currently doesn't support the GFF3 format. We do intend to add that at some point in the future, but we don't have a schedule of when that feature will be available.
Doing a quick search on those two formats, there appears to be quite a number of conversion tools from genbank to gff3. However, I'm not sure if those tools will convert in the other direction.
Asked: 2017-03-22 09:09:19 -0500
Seen: 3,455 times
Last updated: Mar 31 '17
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